Examples : samtools, bed, topic:conversion

20 tool(s) found

Tool Description Topics Available version(s)
Add metadata to a BIOM table Conversion Format validation 8
AXT to concatenated FASTA Converts an AXT formatted file to a concatenated FASTA alignment Conversion 1
AXT to FASTA Converts an AXT formatted file to FASTA format Conversion 1
AXT to LAV Converts an AXT formatted file to LAV format Conversion 1
bax2bam converts PacBio basecall format (bax.h5) into BAM Conversion 2
BED-to-bigBed converter Conversion 2
BED-to-GFF converter Conversion 1
BLAST XML to tabular Convert BLAST XML output to tabular Conversion 18
Circos: bigWig to Scatter reformats bigWig files to prepare for Circos 2d scatter/line/histogram plots Conversion 10
Circos: Interval to Circos Text Labels reformats interval files to prepare for Circos text labels Conversion 10
Circos: Interval to Tiles reformats interval files to prepare for Circos tile plots Conversion 10
FASTQ to FASTA converter Conversion 5
GFF-to-BED converter Conversion 1
GTF-to-BEDGraph converter Conversion 1
JBrowse - Data Directory to Standalone upgrades the bare data directory to a full JBrowse instance Conversion 30
MaxQuant Phosphopeptide Preprocessing Prep phosphoproteomic MaxQuant output for statistical anlaysis. Aggregation Conversion Sequence annotation Sequence database search 2
NCBI BLAST+ convert2blastmask Convert masking information in lower-case masked FASTA input to file formats suitable for makeblastdb Conversion 15
Pindel2Vcf convert Pindel to VCF and index Conversion 1
pyteomics convert mztab to tabular Conversion 1
Tabular to FASTQ converter Conversion 5