hicFindTADs identify TAD boundaries by computing the degree of separation of each Hi-C matrix bin

hicexplorer_hicfindtads

Version Tool Shed Owner Galaxy instances where the tool is available
3.6+galaxy1 toolshed.g2.bx.psu.edu bgruening
3.6+galaxy0 toolshed.g2.bx.psu.edu bgruening
3.4.3.0 toolshed.g2.bx.psu.edu bgruening
3.4.3.0 toolshed.g2.bx.psu.edu bgruening
3.4.2.0 toolshed.g2.bx.psu.edu bgruening
3.4.1.0 toolshed.g2.bx.psu.edu bgruening
3.3.1.0 toolshed.g2.bx.psu.edu bgruening
2.1.4.0 toolshed.g2.bx.psu.edu bgruening
2.1.4.0 toolshed.g2.bx.psu.edu bgruening
2.1.2.0 toolshed.g2.bx.psu.edu bgruening
2.1.0 toolshed.g2.bx.psu.edu bgruening
2.0.0 toolshed.g2.bx.psu.edu bgruening
1.8.1.0 toolshed.g2.bx.psu.edu bgruening
1.8.0 toolshed.g2.bx.psu.edu bgruening
1.7.2.0 toolshed.g2.bx.psu.edu bgruening
1.7.1.0 toolshed.g2.bx.psu.edu bgruening