htseq-count - Count aligned reads in a BAM file that overlap features in a GFF file

htseq_count

Version	Tool Shed	Owner	Galaxy instances where the tool is available
0.9.1+galaxy1	toolshed.g2.bx.psu.edu	lparsons	galaxy.genelab.nasa.gov galaxy.genouest.org galaxy.hyphy.org usegalaxy.be usegalaxy.eu usegalaxy.fr usegalaxy.no usegalaxy.org usegalaxy.org.au
0.9.1	toolshed.g2.bx.psu.edu	lparsons	usegalaxy.be usegalaxy.org usegalaxy.org.au
0.9.1	toolshed.g2.bx.psu.edu	lparsons	bipaa-galaxy.genouest.org galaxy.genouest.org galaxy.mesocentre.uca.fr usegalaxy.eu usegalaxy.fr
0.6.1galaxy3	toolshed.g2.bx.psu.edu	lparsons	bf2i-galaxy.insa-lyon.fr:8080 galaxy.genouest.org galaxy.ugent.be usegalaxy.eu usegalaxy.org
0.6.1galaxy2	toolshed.g2.bx.psu.edu	lparsons	galaxy.sb-roscoff.fr usegalaxy.eu
0.6.1galaxy1	toolshed.g2.bx.psu.edu	lparsons	usegalaxy.eu usegalaxy.org
0.4.1	toolshed.g2.bx.psu.edu	lparsons	143.169.238.104/galaxy
0.4.1	toolshed.g2.bx.psu.edu	lparsons	usegalaxy.eu
0.3.2	toolshed.g2.bx.psu.edu	lparsons	143.169.238.104/galaxy