Examples : samtools, bed, topic:conversion

14 tool(s) found

Tool Description Topics Available version(s)
Copernicus Atmosphere Data Store for retrieving data from the Atmosphere Monitoring Service Data retrieval Format detection Formatting 1
Copernicus Climate Data Store for retrieveing climate data Data retrieval Format detection Formatting 1
Copernicus Essential Climate Variables for assessing climate variability Data retrieval Format detection Formatting 2
Get Fasta from BioMAJ gets fasta genome corresponding to built-in indexes Data retrieval 1
NCBI BLAST+ blastdbcmd entry(s) Extract sequence(s) from BLAST database Data retrieval Database search 16
NCBI BLAST+ blastn Search nucleotide database with nucleotide query sequence(s) Data retrieval Database search Sequence similarity search 17
NCBI BLAST+ blastp Search protein database with protein query sequence(s) Data retrieval Database search Sequence similarity search 17
NCBI BLAST+ blastx Search protein database with translated nucleotide query sequence(s) Data retrieval Database search Sequence similarity search 16
NCBI BLAST+ database info Show BLAST database information from blastdbcmd Data retrieval 16
NCBI BLAST+ rpsblast Search protein domain database (PSSMs) with protein query sequence(s) Data retrieval Database search Sequence similarity search 15
NCBI BLAST+ rpstblastn Search protein domain database (PSSMs) with translated nucleotide query sequence(s) Data retrieval Database search Sequence similarity search 15
NCBI BLAST+ tblastn Search translated nucleotide database with protein query sequence(s) Data retrieval Database search Sequence similarity search 18
NCBI BLAST+ tblastx Search translated nucleotide database with translated nucleotide query sequence(s) Data retrieval Database search Sequence similarity search 17
Retrieve FASTA from NCBI Data retrieval 2