15 tool(s) found

Tool Description Topics Available version(s)
Compare two Datasets to find common or distinct rows Filtering 1
Coverage of a set of intervals on second set of intervals Comparison Filtering 4
Cut columns from a table Filtering 2
Fetch closest non-overlapping feature for every interval Filtering 3
Filter by quality Filtering 6
Filter FASTQ reads by quality score and length Filtering 4
Filter SAM or BAM files on FLAG MAPQ RG LN or by region Filtering Nucleic acid sequence analysis 2
Filter sequences by length Filtering 6
FROGS Pre-process merging, denoising and dereplication. Filtering 4
Intersect the intervals of two datasets Filtering 5
Pick Fasta sequences with header satisfying a string query Filtering 2
Quality-aware fastq demultiplexer This program demultiplexes fastq data having "in-line" barcodes, based on a given list of barcodes and a barcode start position. It tries to assign each fastq record to the most likely barcode, taking into account the sequence qualities (interpreted as being Sanger-encoded). Filtering Splitting 1
Select lines that match an expression Filtering 3
Select first lines from a dataset Filtering 3
Subtract the intervals of two datasets Filtering 5