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GalaxyCat
v0.5.0
Tools
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Examples :
samtools
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bed
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topic:conversion
7 tool(s) found
Tool
Description
Topics
Available version(s)
CapsuleFinder
Program that detects capsule systems with high accuracy in proteic sequences. It is based on the program MacsyFinder which uses HMM profiles for the detection of the essential proteins of capsule biogenesis.
Coding region prediction
1
Cas_finder
Detection and classification of Cas (CRISPR-associated) proteins using MacSyFinder.
Coding region prediction
1
ConjScan
MacSyFinder-based detection of Conjugative elements using systems modelling and similarity search
Coding region prediction
1
fastacmd
: retrieves FASTA formatted sequences from a blast database
Coding region prediction
1
FragGeneScan
Application for finding (fragmented) genes in short and Error-prone Reads.
Coding region prediction
1
Prokka
Prokaryotic genome annotation
Coding region prediction
Gene prediction
Genome annotation
11
TXSScan
MacSyFinder-based detection of protein secretion systems and related appendages using systems modelling and similarity search.
Coding region prediction
1