90 tool(s) found

Tool Description Topics Available version(s)
Add column to an existing dataset Editing 2
Change Case of selected columns 2
CML to InChI 3
CML to mol2 3
CML to SDF 3
CML to SMILES 3
Column Join on Collections 5
Compare two Datasets to find common or distinct rows Filtering 1
Condense consecutive characters 2
Convert delimiters to TAB 1
Convert BCF to uncompressed BCF 1
Convert BED to Feature Location Index 1
Convert BED to GFF 2
Convert Biom1 to Biom2 1
Convert Biom2 to Biom1 1
Convert FASTA to 2bit 2
Convert FASTA to Bowtie base space Index 2
Convert FASTA to Bowtie color space Index 2
Convert FASTA to fai file 1
Convert FASTA to len file 2
Convert FASTA to Tabular 1
Convert Genomic Intervals To BED 1
Convert Genomic Intervals To Coverage 2
Convert Genomic Intervals To Strict BED 2
Convert Genomic Intervals To Strict BED12 1
Convert Genomic Intervals To Strict BED6 2
Convert GFF to BED 2
Convert GFF to Feature Location Index 1
Convert Len file to Linecount 2
Convert lped to fped 2
Convert lped to plink pbed 2
Convert MAF to Fasta 2
Convert MAF to Genomic Intervals 2
Convert Picard Interval List to BED6 converter 2
Convert plink pbed to ld reduced format 2
Convert plink pbed to linkage lped 2
Convert Ref taxonomy to Seq Taxonomy converts 2 or 3 column sequence taxonomy file to a 2 column mothur taxonomy_outline format 2
Convert SAM to BAM without sorting 1
Convert tabular to dbnsfp 2
Convert uncompressed BCF to BCF 1
Create single interval as a new dataset 1
Data Fetch Query and retrieval 1
Extract features from GFF data 1
FastQC Read Quality reports Sequence composition calculation Sequencing quality control Statistical calculation 18
Filter data on any column using simple expressions Formatting 2
Filter GFF data by attribute using simple expressions 3
Filter GFF data by feature count using simple expressions 2
Filter GTF data by attribute values_list 2
Group data by a column and perform aggregate operation on other columns. 4
HISAT2 A fast and sensitive alignment program 18
htseq-count - Count aligned reads in a BAM file that overlap features in a GFF file 9
InChI to CML 3
InChI to MOL 3
InChI to MOL2 3
InChI to SDF 3
InChI to SMILES 3
Join two Datasets side by side on a specified field 4
Kallisto quant - quantify abundances of RNA-Seq transcripts 8
Line/Word/Character count of a dataset 1
Merge Columns together 4
MOL to CML 3
MOL to MOL2 3
MOL to SMILES 3
MOL2 to CML 3
MOL2 to InChI 3
MOL2 to MOL 3
MOL2 to SDF 3
MOL2 to SMILES 3
Paste two files side by side 1
Remove beginning of a file 1
SDF to CML 3
SDF to InChI 3
SDF to mol2 3
SDF to SMILES 3
Secure Hash / Message Digest on a dataset 2
Select lines that match an expression Filtering 3
Select first lines from a dataset Filtering 3
Select last lines from a dataset 2
Select random lines from a file 2
SMILES to CML 3
SMILES to InChI 3
SMILES to MOL 3
SMILES to MOL2 3
SMILES to SDF 3
SMILES to SMILES 3
Sort data in ascending or descending order 3
Trim leading or trailing characters 2
Trim Galore! Quality and adapter trimmer of reads 9
Upload File from your computer Query and retrieval 3
Wiggle to Interval 2