Add column |
to an existing dataset |
Editing
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2 |
Change Case |
of selected columns |
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2 |
CML to InChI |
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3 |
CML to mol2 |
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3 |
CML to SDF |
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3 |
CML to SMILES |
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3 |
Column Join |
on Collections |
|
5 |
Compare two Datasets |
to find common or distinct rows |
Filtering
|
1 |
Condense |
consecutive characters |
|
2 |
Convert |
delimiters to TAB |
|
1 |
Convert BCF to uncompressed BCF |
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|
1 |
Convert BED to Feature Location Index |
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1 |
Convert BED to GFF |
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2 |
Convert Biom1 to Biom2 |
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1 |
Convert Biom2 to Biom1 |
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1 |
Convert FASTA to 2bit |
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2 |
Convert FASTA to Bowtie base space Index |
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2 |
Convert FASTA to Bowtie color space Index |
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2 |
Convert FASTA to fai file |
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1 |
Convert FASTA to len file |
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2 |
Convert FASTA to Tabular |
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1 |
Convert Genomic Intervals To BED |
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1 |
Convert Genomic Intervals To Coverage |
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2 |
Convert Genomic Intervals To Strict BED |
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2 |
Convert Genomic Intervals To Strict BED12 |
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1 |
Convert Genomic Intervals To Strict BED6 |
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2 |
Convert GFF to BED |
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2 |
Convert GFF to Feature Location Index |
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1 |
Convert Len file to Linecount |
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2 |
Convert lped to fped |
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2 |
Convert lped to plink pbed |
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2 |
Convert MAF to Fasta |
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2 |
Convert MAF to Genomic Intervals |
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2 |
Convert Picard Interval List to BED6 |
converter |
|
2 |
Convert plink pbed to ld reduced format |
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2 |
Convert plink pbed to linkage lped |
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2 |
Convert Ref taxonomy to Seq Taxonomy |
converts 2 or 3 column sequence taxonomy file to a 2 column mothur taxonomy_outline format |
|
2 |
Convert SAM to BAM without sorting |
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1 |
Convert tabular to dbnsfp |
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2 |
Convert uncompressed BCF to BCF |
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|
1 |
Create single interval |
as a new dataset |
|
1 |
Data Fetch |
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Query and retrieval
|
1 |
Extract features |
from GFF data |
|
1 |
FastQC |
Read Quality reports |
Sequence composition calculation
Sequencing quality control
Statistical calculation
|
18 |
Filter |
data on any column using simple expressions |
Formatting
|
2 |
Filter GFF data by attribute |
using simple expressions |
|
3 |
Filter GFF data by feature count |
using simple expressions |
|
2 |
Filter GTF data by attribute values_list |
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|
2 |
Group |
data by a column and perform aggregate operation on other columns. |
|
4 |
HISAT2 |
A fast and sensitive alignment program |
|
18 |
htseq-count |
- Count aligned reads in a BAM file that overlap features in a GFF file |
|
9 |
InChI to CML |
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|
3 |
InChI to MOL |
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3 |
InChI to MOL2 |
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3 |
InChI to SDF |
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3 |
InChI to SMILES |
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3 |
Join two Datasets |
side by side on a specified field |
|
4 |
Kallisto quant |
- quantify abundances of RNA-Seq transcripts |
|
8 |
Line/Word/Character count |
of a dataset |
|
1 |
Merge Columns |
together |
|
4 |
MOL to CML |
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3 |
MOL to MOL2 |
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3 |
MOL to SMILES |
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3 |
MOL2 to CML |
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3 |
MOL2 to InChI |
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3 |
MOL2 to MOL |
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3 |
MOL2 to SDF |
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3 |
MOL2 to SMILES |
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3 |
Paste |
two files side by side |
|
1 |
Remove beginning |
of a file |
|
1 |
SDF to CML |
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3 |
SDF to InChI |
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3 |
SDF to mol2 |
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3 |
SDF to SMILES |
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3 |
Secure Hash / Message Digest |
on a dataset |
|
2 |
Select |
lines that match an expression |
Filtering
|
3 |
Select first |
lines from a dataset |
Filtering
|
3 |
Select last |
lines from a dataset |
|
2 |
Select random lines |
from a file |
|
2 |
SMILES to CML |
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3 |
SMILES to InChI |
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3 |
SMILES to MOL |
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|
3 |
SMILES to MOL2 |
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3 |
SMILES to SDF |
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3 |
SMILES to SMILES |
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|
3 |
Sort |
data in ascending or descending order |
|
3 |
Trim |
leading or trailing characters |
|
2 |
Trim Galore! |
Quality and adapter trimmer of reads |
|
9 |
Upload File |
from your computer |
Query and retrieval
|
3 |
Wiggle to Interval |
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|
2 |