Examples : samtools, bed, topic:conversion

7 tool(s) found

Tool Description Topics Available version(s)
GIANT-Differential Expression with LIMMA Use LIMMA to detect differentially expressed genes 2
GIANT-Factor file generator Generate factor file used by other GIANT tools 2
GIANT-GSEA Formating Format input files for GSEA software 2
GIANT-Heatmap and Hierarchical clustering Run hierarchical clustering and plot heatmap from expression data and/or differential expression analysis 2
GIANT-Normalization with APT Summarize Apply Affymetrix Power Tool summarize function to .CEL collection 2
GIANT-Plot volcanos Plot volcano from tabular file 2
GIANT-QC Plots Descriptive plots of .CEL collections or normalized expression data 2